Information for 2-CCCTGTCTCT (Motif 8)

A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif36.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets35.5 +/- 25.9bp
Average Position of motif in Background54.7 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCTGTCTCT---
-NCTGTCAATCAN
 A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCTGTCTCT
-GCTGTG---
 A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCCTGTCTCT--
GSCTGTCACTCA
 A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCTGTCTCT
-CCTGTCAA-
 A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCTGTCTCT--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCTGTCTCT---
-ACTTTCACTTTC
 A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCTGTCTCT
-GCTGTCAA-
 A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCTGTCTCT--
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGTCTCT----
TCACTTTCACTTTCN
 A C G T A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGTCTCT
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C