Information for 4-AACTACCCTGACCTGA (Motif 6)

G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A
Reverse Opposite:
A C G T G T A C C G T A A C T G A C T G A C G T A G T C C G T A C T A G C T A G A C T G A C G T G T C A A C T G C G A T A C G T
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.719
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.7 +/- 28.6bp
Average Position of motif in Background51.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AACTACCCTGACCTGA
--TGACCTTGACCT--
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AACTACCCTGACCTGA
--TGACCTTGACCT--
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:AACTACCCTGACCTGA
--------TGACCTYA
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AACTACCCTGACCTGA
------CCTCACCTG-
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:AACTACCCTGACCTGA
--------TGACCT--
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AACTACCCTGACCTGA
-------GTGACCTT-
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:AACTACCCTGACCTGA--
--------TGACCTTGAT
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:AACTACCCTGACCTGA-
-------CTGACCTTTG
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AACTACCCTGACCTGA-
-------NTGACCTTGA
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AACTACCCTGACCTGA-
----CNNTTGACCTTTG
 G T C A C G T A T A G C A C G T G T C A G T A C A G T C A G T C C G A T C T A G G T C A T A G C A G T C A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G