Information for 3-CSGCCCWSYCKKGKCA (Motif 4)

A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T A C A T G C G T A C G T C A A C T G C T A G A T C G C G T A A C T G A C T G A T C G A G T C T A C G A C T G
p-value:1e-9
log p-value:-2.114e+01
Information Content per bp:1.808
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.8 +/- 25.3bp
Average Position of motif in Background47.2 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CSGCCCWSYCKKGKCA
TCCGCCCCCGCATT---
 A C G T A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CSGCCCWSYCKKGKCA
YCCGCCCACGCN-----
 A C G T A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CSGCCCWSYCKKGKCA
GCTCCGCCCMCY-------
 A C G T A C G T A C G T A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CSGCCCWSYCKKGKCA
------WDNCTGGGCA
 A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CSGCCCWSYCKKGKCA
CCCCCGCCCCCGCC-----
 A C G T A C G T A C G T A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CSGCCCWSYCKKGKCA
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CSGCCCWSYCKKGKCA
GGTCCCGCCCCCTTCTC---
 A C G T A C G T A C G T A C G T A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CSGCCCWSYCKKGKCA
GCCMCGCCCMCY-------
 A C G T A C G T A C G T A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CSGCCCWSYCKKGKCA
GCCCCGCCCCCTCCC----
 A C G T A C G T A C G T A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CSGCCCWSYCKKGKCA-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A G T C A T C G A C T G A T G C A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A T C G C A G T A G T C C G T A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A