Information for 6-ACARTMMRCAGASRCW (Motif 13)

C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
Reverse Opposite:
C G T A A C T G A G C T T A C G A C G T A T G C A C G T A C T G A G T C A C G T A C G T C G T A A G C T A C G T A C T G A C G T
p-value:1e-7
log p-value:-1.647e+01
Information Content per bp:1.824
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 26.4bp
Average Position of motif in Background69.2 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACARTMMRCAGASRCW
TGACANARRCCAGRC---
 A C G T A C G T C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACARTMMRCAGASRCW
TCCAATCCACA------
 A C G T C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACARTMMRCAGASRCW
AAAGTAAACAAAAATT
 C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACARTMMRCAGASRCW
SSAATCCACANN----
 C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACARTMMRCAGASRCW
CAAAAGTAAACAAAG---
 A C G T A C G T C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACARTMMRCAGASRCW
---GTAAACAG-----
 C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACARTMMRCAGASRCW
-AAGTAAACAAA----
 C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACARTMMRCAGASRCW
AAAAAGTAAACAAACAC-
 A C G T A C G T C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACARTMMRCAGASRCW
AAAAAGTAAACAAACAC-
 A C G T A C G T C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:ACARTMMRCAGASRCW-
-------CCAGACRSVB
 C G T A A G T C C G T A C T A G A C G T G T C A G T C A C T A G A G T C C G T A A T C G C G T A A T C G C T G A A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C