Information for 4-ATGGATGGTG (Motif 10)

C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G
Reverse Opposite:
G T A C C G T A A G T C A G T C G T C A C G A T A G T C A G T C G T C A C G A T
p-value:1e-7
log p-value:-1.779e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif4.52%
Number of Background Sequences with motif115.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets51.0 +/- 29.1bp
Average Position of motif in Background48.2 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATGGATGGTG
ATGATKGATGRC-
 A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGGATGGTG-
CGTGGGTGGTCC
 A C G T C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATGGATGGTG----
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

ZNF143/MA0088.2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATGGATGGTG----
CAATGCATTGTGGGTA
 A C G T A C G T C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G A C G T A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATGGATGGTG
GTGGAT----
 C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ATGGATGGTG--
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------ATGGATGGTG
ACTATGAATGAATGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATGGATGGTG
--GGGGGGGG
 C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G
A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGGATGGTG
NTGGAATGTG
 C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATGGATGGTG-
TTTGATTGATGN
 A C G T C G T A A C G T A C T G A C T G C G T A C A G T A C T G C T A G A C G T A C T G A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G