Information for 1-GAAAGAGCAACAT (Motif 1)

A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T C T A G A C G T A C G T A C T G A G T C A C G T G T A C A C G T C G A T A C G T A G T C
p-value:1e-11
log p-value:-2.725e+01
Information Content per bp:1.941
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.4 +/- 12.8bp
Average Position of motif in Background52.4 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAAAGAGCAACAT
GAAACTGAAACT-
 A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAAGAGCAACAT
GAAAGTGAAAGT-
 A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAAAGAGCAACAT
GAAAMTGAAACT-
 A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAAGAGCAACAT
GAAASYGAAASY-
 A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAAGAGCAACAT
GRAASTGAAAST-
 A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGAGCAACAT-
GGAAANTGAAACTNA
 A C G T A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAAGAGCAACAT
GAAAAAATTGCAAGG-
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAAGAGCAACAT----
GGAAAGCGAAACCAAAAC
 A C G T A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAAGAGCAACAT
ACGAAAGCGAAAGT-
 A C G T A C G T A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAAGAGCAACAT--
CAAACAACAACACCT
 A C T G C G T A C G T A C G T A A C T G C G T A A C T G A G T C G T C A C G T A A G T C C G T A A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T