Information for 13-CCTGCAGAYTCCM (Motif 8)

A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G C T A G G T C A C T A G C A G T A G T C A C G T A C T G A G T C C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.841
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif57.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets58.4 +/- 29.1bp
Average Position of motif in Background52.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGAYTCCM
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGCAGAYTCCM
CCTGCTGAGH---
 A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCAGAYTCCM
SNGCACCTGCHS------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCAGAYTCCM
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCTGCAGAYTCCM
NNCACCTGNN-------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGAYTCCM
NCACCTGTN-------
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCTGCAGAYTCCM
--TGCTGACTCA-
 A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGCAGAYTCCM
RYHYACCTGB--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGAYTCCM
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGAYTCCM
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G T C A A C T G G T C A A G T C A C G T A G T C A G T C G T A C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T