Information for 8-CGGAAATCAA (Motif 7)

A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G C G T A A C G T A C G T A C G T A G T C G T A C T C A G
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.874
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets40.8 +/- 29.3bp
Average Position of motif in Background50.3 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CGGAAATCAA----
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0012.1_Elf3_1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CGGAAATCAA
AACAAGGAAGTAA-
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGGAAATCAA-
-HNRAATCAAT
 A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A A C G T
A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAATCAA
NNTGGAAANN--
 A C G T A C G T A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CGGAAATCAA--
--CAAATCACTG
 A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CGGAAATCAA
NACAGGAAAT---
 A C G T A C G T A C G T A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAATCAA
RCCGGAARYN--
 A C G T A C G T A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAATCAA
DCCGGAARYN--
 A C G T A C G T A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T

ERG/MA0474.2/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGGAAATCAA
ACCGGAAGTG--
 A C G T A C G T A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A
C G T A T G A C T G A C C T A G A C T G G T C A G C T A T C A G A G C T T A C G A C G T A C G T

PB0011.1_Ehf_1/Jaspar

Match Rank:10
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------CGGAAATCAA
AGGACCCGGAAGTAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A C G T A C G T A A C G T G T A C C G T A C T G A
T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A A C G T