Information for 18-WGACCTGMTTCWS (Motif 14)

C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
Reverse Opposite:
A T C G C G T A A C T G G T C A C G T A A C T G A G T C C G T A A C T G C T A G A C G T A T G C G C A T
p-value:1e-6
log p-value:-1.407e+01
Information Content per bp:1.855
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif48.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets49.0 +/- 23.3bp
Average Position of motif in Background49.3 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:WGACCTGMTTCWS
TGACCTARTT---
 C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WGACCTGMTTCWS
TTGACCTANTTATN
 A C G T C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:WGACCTGMTTCWS
NCACCTGTN----
 C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:WGACCTGMTTCWS
TGACCTTGAT---
 C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--WGACCTGMTTCWS
RYHYACCTGB-----
 A C G T A C G T C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-WGACCTGMTTCWS
NNCACCTGNN----
 A C G T C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:WGACCTGMTTCWS
TGACCT-------
 C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--WGACCTGMTTCWS
CCTCACCTG------
 A C G T A C G T C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:WGACCTGMTTCWS
CCACCTGTTGCAT
 C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-WGACCTGMTTCWS--
GAGCCCTTGTCCCTAA
 A C G T C G T A A T C G C G T A A G T C A G T C A C G T A C T G G T A C A C G T A C G T A G T C G C A T A T G C A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G