Information for 16-CTCCATGCATTTT (Motif 12)

A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C G T A C T G A T G C G T C A A C G T A C T G A C T G C T G A A C T G
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 20.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTCCATGCATTTT----
--CCTTGCAATTTTTNN
 A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCCATGCATTTT-
--GCNGCCATCTTG
 A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTCCATGCATTTT-
----ATGAATATTC
 A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

ZNF143/MA0088.2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCCATGCATTTT-----
--CAATGCATTGTGGGTA
 A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCCATGCATTTT
CGCCCCCTGACA----
 A C G T A C G T A C G T A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCCATGCATTTT-
----ATGMATATDC
 A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCCATGCATTTT---
-CTCATGAATATTCAT
 A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTCCATGCATTTT----
--TCATGAATWATTCAT
 A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTCCATGCATTTT----
--WYATGCATWATGCAT
 A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTCCATGCATTTT---
------CCATTGTTYB
 A G T C A G C T A G T C A G T C C G T A A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G