Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-306 | -7.062e+02 | 0.0000 | 601.0 | 76.56% | 6994.3 | 16.09% | motif file (matrix) |
svg |
2 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-289 | -6.676e+02 | 0.0000 | 625.0 | 79.62% | 8407.0 | 19.34% | motif file (matrix) |
svg |
3 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-272 | -6.282e+02 | 0.0000 | 567.0 | 72.23% | 6805.8 | 15.66% | motif file (matrix) |
svg |
4 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-253 | -5.834e+02 | 0.0000 | 649.0 | 82.68% | 10809.1 | 24.86% | motif file (matrix) |
svg |
5 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-220 | -5.081e+02 | 0.0000 | 461.0 | 58.73% | 4998.2 | 11.50% | motif file (matrix) |
svg |
6 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-220 | -5.066e+02 | 0.0000 | 453.0 | 57.71% | 4790.3 | 11.02% | motif file (matrix) |
svg |
7 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-179 | -4.137e+02 | 0.0000 | 390.0 | 49.68% | 4166.2 | 9.58% | motif file (matrix) |
svg |
8 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-172 | -3.974e+02 | 0.0000 | 383.0 | 48.79% | 4176.6 | 9.61% | motif file (matrix) |
svg |
9 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-172 | -3.968e+02 | 0.0000 | 340.0 | 43.31% | 3103.5 | 7.14% | motif file (matrix) |
svg |
10 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-160 | -3.704e+02 | 0.0000 | 365.0 | 46.50% | 4027.8 | 9.27% | motif file (matrix) |
svg |
11 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-158 | -3.657e+02 | 0.0000 | 294.0 | 37.45% | 2383.7 | 5.48% | motif file (matrix) |
svg |
12 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-155 | -3.571e+02 | 0.0000 | 402.0 | 51.21% | 5272.9 | 12.13% | motif file (matrix) |
svg |
13 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-139 | -3.218e+02 | 0.0000 | 394.0 | 50.19% | 5582.0 | 12.84% | motif file (matrix) |
svg |
14 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-116 | -2.692e+02 | 0.0000 | 381.0 | 48.54% | 6094.7 | 14.02% | motif file (matrix) |
svg |
15 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-109 | -2.515e+02 | 0.0000 | 334.0 | 42.55% | 4892.9 | 11.26% | motif file (matrix) |
svg |
16 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-103 | -2.382e+02 | 0.0000 | 343.0 | 43.69% | 5425.6 | 12.48% | motif file (matrix) |
svg |
17 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-99 | -2.298e+02 | 0.0000 | 246.0 | 31.34% | 2747.6 | 6.32% | motif file (matrix) |
svg |
18 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-72 | -1.673e+02 | 0.0000 | 579.0 | 73.76% | 18193.6 | 41.85% | motif file (matrix) |
svg |
19 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-31 | -7.259e+01 | 0.0000 | 309.0 | 39.36% | 9063.0 | 20.85% | motif file (matrix) |
svg |
20 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-27 | -6.314e+01 | 0.0000 | 102.0 | 12.99% | 1578.1 | 3.63% | motif file (matrix) |
svg |
21 |
| PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer | 1e-22 | -5.138e+01 | 0.0000 | 90.0 | 11.46% | 1483.2 | 3.41% | motif file (matrix) |
svg |
22 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-18 | -4.355e+01 | 0.0000 | 44.0 | 5.61% | 430.3 | 0.99% | motif file (matrix) |
svg |
23 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-13 | -3.033e+01 | 0.0000 | 220.0 | 28.03% | 7521.5 | 17.30% | motif file (matrix) |
svg |
24 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-11 | -2.606e+01 | 0.0000 | 49.0 | 6.24% | 860.9 | 1.98% | motif file (matrix) |
svg |
25 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-10 | -2.482e+01 | 0.0000 | 42.0 | 5.35% | 683.8 | 1.57% | motif file (matrix) |
svg |
26 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-9 | -2.214e+01 | 0.0000 | 49.0 | 6.24% | 966.1 | 2.22% | motif file (matrix) |
svg |
27 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-9 | -2.193e+01 | 0.0000 | 33.0 | 4.20% | 492.8 | 1.13% | motif file (matrix) |
svg |
28 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-9 | -2.157e+01 | 0.0000 | 31.0 | 3.95% | 445.3 | 1.02% | motif file (matrix) |
svg |
29 |
| ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer | 1e-8 | -2.052e+01 | 0.0000 | 21.0 | 2.68% | 218.1 | 0.50% | motif file (matrix) |
svg |
30 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-8 | -1.982e+01 | 0.0000 | 62.0 | 7.90% | 1494.7 | 3.44% | motif file (matrix) |
svg |
31 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-8 | -1.932e+01 | 0.0000 | 56.0 | 7.13% | 1298.7 | 2.99% | motif file (matrix) |
svg |
32 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-7 | -1.841e+01 | 0.0000 | 24.0 | 3.06% | 321.0 | 0.74% | motif file (matrix) |
svg |
33 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-7 | -1.786e+01 | 0.0000 | 23.0 | 2.93% | 304.4 | 0.70% | motif file (matrix) |
svg |
34 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-7 | -1.708e+01 | 0.0000 | 14.0 | 1.78% | 114.4 | 0.26% | motif file (matrix) |
svg |
35 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-6 | -1.608e+01 | 0.0000 | 49.0 | 6.24% | 1174.5 | 2.70% | motif file (matrix) |
svg |
36 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-6 | -1.605e+01 | 0.0000 | 84.0 | 10.70% | 2541.8 | 5.85% | motif file (matrix) |
svg |
37 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.604e+01 | 0.0000 | 170.0 | 21.66% | 6383.3 | 14.68% | motif file (matrix) |
svg |
38 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-6 | -1.589e+01 | 0.0000 | 45.0 | 5.73% | 1039.3 | 2.39% | motif file (matrix) |
svg |
39 |
| CRE(bZIP)/Promoter/Homer | 1e-6 | -1.571e+01 | 0.0000 | 24.0 | 3.06% | 371.4 | 0.85% | motif file (matrix) |
svg |
40 |
| Sp1(Zf)/Promoter/Homer | 1e-6 | -1.541e+01 | 0.0000 | 31.0 | 3.95% | 586.4 | 1.35% | motif file (matrix) |
svg |
41 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-6 | -1.500e+01 | 0.0000 | 30.0 | 3.82% | 566.4 | 1.30% | motif file (matrix) |
svg |
42 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-6 | -1.448e+01 | 0.0000 | 83.0 | 10.57% | 2599.6 | 5.98% | motif file (matrix) |
svg |
43 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-5 | -1.222e+01 | 0.0000 | 43.0 | 5.48% | 1119.5 | 2.58% | motif file (matrix) |
svg |
44 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.210e+01 | 0.0000 | 101.0 | 12.87% | 3563.9 | 8.20% | motif file (matrix) |
svg |
45 |
| Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer | 1e-5 | -1.202e+01 | 0.0000 | 111.0 | 14.14% | 4023.0 | 9.25% | motif file (matrix) |
svg |
46 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-4 | -1.116e+01 | 0.0001 | 33.0 | 4.20% | 796.3 | 1.83% | motif file (matrix) |
svg |
47 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-4 | -1.089e+01 | 0.0001 | 38.0 | 4.84% | 992.2 | 2.28% | motif file (matrix) |
svg |
48 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-4 | -1.042e+01 | 0.0002 | 44.0 | 5.61% | 1249.0 | 2.87% | motif file (matrix) |
svg |
49 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-4 | -9.662e+00 | 0.0005 | 83.0 | 10.57% | 2967.1 | 6.83% | motif file (matrix) |
svg |
50 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-4 | -9.568e+00 | 0.0005 | 34.0 | 4.33% | 903.0 | 2.08% | motif file (matrix) |
svg |
51 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-4 | -9.336e+00 | 0.0006 | 73.0 | 9.30% | 2548.1 | 5.86% | motif file (matrix) |
svg |
52 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-4 | -9.306e+00 | 0.0006 | 55.0 | 7.01% | 1768.4 | 4.07% | motif file (matrix) |
svg |
53 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.755e+00 | 0.0011 | 117.0 | 14.90% | 4643.4 | 10.68% | motif file (matrix) |
svg |
54 |
| ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer | 1e-3 | -8.413e+00 | 0.0015 | 6.0 | 0.76% | 46.1 | 0.11% | motif file (matrix) |
svg |
55 |
| Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.972e+00 | 0.0023 | 141.0 | 17.96% | 5909.9 | 13.59% | motif file (matrix) |
svg |
56 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -7.956e+00 | 0.0023 | 30.0 | 3.82% | 829.7 | 1.91% | motif file (matrix) |
svg |
57 |
| Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.799e+00 | 0.0026 | 15.0 | 1.91% | 295.2 | 0.68% | motif file (matrix) |
svg |
58 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-3 | -7.779e+00 | 0.0026 | 140.0 | 17.83% | 5887.6 | 13.54% | motif file (matrix) |
svg |
59 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-3 | -7.426e+00 | 0.0037 | 101.0 | 12.87% | 4039.0 | 9.29% | motif file (matrix) |
svg |
60 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -7.107e+00 | 0.0050 | 31.0 | 3.95% | 915.7 | 2.11% | motif file (matrix) |
svg |
61 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.011e+00 | 0.0054 | 33.0 | 4.20% | 1002.5 | 2.31% | motif file (matrix) |
svg |
62 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -6.985e+00 | 0.0054 | 15.0 | 1.91% | 320.9 | 0.74% | motif file (matrix) |
svg |
63 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -6.920e+00 | 0.0057 | 31.0 | 3.95% | 926.8 | 2.13% | motif file (matrix) |
svg |
64 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.873e+00 | 0.0059 | 11.0 | 1.40% | 195.2 | 0.45% | motif file (matrix) |
svg |
65 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -6.870e+00 | 0.0059 | 7.0 | 0.89% | 85.1 | 0.20% | motif file (matrix) |
svg |
66 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -6.844e+00 | 0.0059 | 10.0 | 1.27% | 166.9 | 0.38% | motif file (matrix) |
svg |
67 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -6.790e+00 | 0.0061 | 106.0 | 13.50% | 4360.2 | 10.03% | motif file (matrix) |
svg |
68 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -6.757e+00 | 0.0062 | 19.0 | 2.42% | 469.1 | 1.08% | motif file (matrix) |
svg |
69 |
| ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.492e+00 | 0.0080 | 25.0 | 3.18% | 710.5 | 1.63% | motif file (matrix) |
svg |
70 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -6.370e+00 | 0.0089 | 23.0 | 2.93% | 638.6 | 1.47% | motif file (matrix) |
svg |
71 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -6.112e+00 | 0.0114 | 24.0 | 3.06% | 691.6 | 1.59% | motif file (matrix) |
svg |
72 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -6.022e+00 | 0.0123 | 24.0 | 3.06% | 696.4 | 1.60% | motif file (matrix) |
svg |
73 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -5.955e+00 | 0.0129 | 93.0 | 11.85% | 3842.8 | 8.84% | motif file (matrix) |
svg |
74 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.811e+00 | 0.0147 | 60.0 | 7.64% | 2291.6 | 5.27% | motif file (matrix) |
svg |
75 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.520e+00 | 0.0194 | 12.0 | 1.53% | 267.8 | 0.62% | motif file (matrix) |
svg |
76 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-2 | -5.509e+00 | 0.0194 | 26.0 | 3.31% | 808.0 | 1.86% | motif file (matrix) |
svg |
77 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.345e+00 | 0.0226 | 20.0 | 2.55% | 574.2 | 1.32% | motif file (matrix) |
svg |
78 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.221e+00 | 0.0252 | 25.0 | 3.18% | 785.7 | 1.81% | motif file (matrix) |
svg |
79 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.158e+00 | 0.0265 | 17.0 | 2.17% | 466.8 | 1.07% | motif file (matrix) |
svg |
80 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-2 | -4.997e+00 | 0.0308 | 22.0 | 2.80% | 675.6 | 1.55% | motif file (matrix) |
svg |
81 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -4.907e+00 | 0.0332 | 13.0 | 1.66% | 326.8 | 0.75% | motif file (matrix) |
svg |
82 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.885e+00 | 0.0336 | 9.0 | 1.15% | 186.2 | 0.43% | motif file (matrix) |
svg |
83 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.765e+00 | 0.0374 | 18.0 | 2.29% | 526.8 | 1.21% | motif file (matrix) |
svg |
84 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.762e+00 | 0.0374 | 32.0 | 4.08% | 1120.2 | 2.58% | motif file (matrix) |
svg |
85 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -4.757e+00 | 0.0374 | 8.0 | 1.02% | 157.8 | 0.36% | motif file (matrix) |
svg |
86 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.712e+00 | 0.0380 | 11.0 | 1.40% | 261.2 | 0.60% | motif file (matrix) |
svg |