Information for 20-KKKMATCTGCAGG (Motif 25)

A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A C T G A G T C C G T A A C T G G T C A A C G T A C T G G T A C G T A C G T C A
p-value:1e-2
log p-value:-6.544e+00
Information Content per bp:1.836
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets73.0 +/- 17.1bp
Average Position of motif in Background38.7 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:KKKMATCTGCAGG
---DCTCAGCAGG
 A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:KKKMATCTGCAGG---
----CACAGCAGGGGG
 A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:KKKMATCTGCAGG-----
---DCHCAGCAGGRGGCC
 A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:KKKMATCTGCAGG-----
------SDGCAGGTGCNS
 A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:KKKMATCTGCAGG-
-TTCATTTGCATAT
 A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:KKKMATCTGCAGG
---CAGCTGNT--
 A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:KKKMATCTGCAGG
-TGAGTCAGCA--
 A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KKKMATCTGCAGG---
TNTAATTTGCATACNA
 A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KKKMATCTGCAGG---
TNTAATTTGCATACNA
 A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----KKKMATCTGCAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G T G A C C G T A A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T