Information for 17-CCYGGGRSWGCTC (Motif 23)

A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C C G T A A T C G A G T C A T G C A G T C A G T C C T G A A C T G A T C G
p-value:1e-4
log p-value:-9.808e+00
Information Content per bp:1.866
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.3 +/- 29.6bp
Average Position of motif in Background54.4 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CCYGGGRSWGCTC-
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCYGGGRSWGCTC
CCCCCCCGGGGGGGT--
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCYGGGRSWGCTC
CCCCCCCGGGGGGGT--
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCYGGGRSWGCTC
ATGCCCGGGCATGT--
 A C G T A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCYGGGRSWGCTC
GTCCCCAGGGGA-----
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------CCYGGGRSWGCTC-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCYGGGRSWGCTC
CACCCCCGGGGGGG---
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCYGGGRSWGCTC
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCYGGGRSWGCTC
TGCCTGCGYCMCCTT
 A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCYGGGRSWGCTC
WTGSCCTSAGGS-----
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C T G A C T G A T C G T C A G A T G C C G A T A C T G G T A C A C G T A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T