Information for 7-GCCCTCWSSTGGKCKW (Motif 12)

A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
Reverse Opposite:
G C T A G T C A A C T G T G A C A G T C A G T C T G C A T A G C T A G C C G T A A C T G C T G A A C T G A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.835
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.8 +/- 32.3bp
Average Position of motif in Background63.6 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.76
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCWSSTGGKCKW
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCWSSTGGKCKW
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCWSSTGGKCKW
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCWSSTGGKCKW
TGWCCTCARNTGACC--
 A C G T A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCCTCWSSTGGKCKW---
--NNANTGGTGGTCTTNNN
 A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T A C G T A C G T A C G T
A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCWSSTGGKCKW
TGACCTTTCGTGACCTT
 A C G T A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCWSSTGGKCKW
NTGCCCANNGGTNA----
 A C G T A C G T A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCWSSTGGKCKW
GGCCYCCTGCTGDGH--
 A C G T A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCCTCWSSTGGKCKW
--CCTCACCTG-----
 A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCCTCWSSTGGKCKW
CTGCCCGCA---------
 A C G T A C G T A C T G A G T C A G T C A G T C A G C T A G T C C G A T A T C G A T C G A C G T A C T G A C T G A C T G A G T C A C G T C G A T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T