Information for 7-AAGCAATTAA (Motif 12)

C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.551e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 8.8bp
Average Position of motif in Background60.8 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--AAGCAATTAA-----
ACAAGCAATTAATGAAT
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--AAGCAATTAA-----
ACAAGCAATTAATGAAT
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:3
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--AAGCAATTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:4
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--AAGCAATTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Hmx3/MA0898.1/Jaspar

Match Rank:5
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--AAGCAATTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:6
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--AAGCAATTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---AAGCAATTAA---
AAAAACCAATTAAGAA
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---AAGCAATTAA---
AACAACCAATTAATTC
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---AAGCAATTAA---
CAAAACCAATTAATTT
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0063.1_Hoxb8/Jaspar

Match Rank:10
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AAGCAATTAA----
ACCGGCAATTAATAAA
 A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A