Information for 1-SRGCAGCTGY (Motif 1)

A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C
Reverse Opposite:
T C A G A G T C C G T A A T C G A T G C A C G T A C T G A T G C G A T C T A C G
p-value:1e-144
log p-value:-3.333e+02
Information Content per bp:1.784
Number of Target Sequences with motif261.0
Percentage of Target Sequences with motif58.92%
Number of Background Sequences with motif4100.8
Percentage of Background Sequences with motif9.60%
Average Position of motif in Targets50.1 +/- 23.3bp
Average Position of motif in Background51.2 +/- 44.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---SRGCAGCTGY----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:SRGCAGCTGY-
-AGCAGCTGCT
 A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:SRGCAGCTGY--
--GCAGCTGTNN
 A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-SRGCAGCTGY-
NNAGCAGCTGCT
 A C G T A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:SRGCAGCTGY
CAGCAGCTGN
 A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:SRGCAGCTGY-
-CGCAGCTGCG
 A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:SRGCAGCTGY--
SDGCAGGTGCNS
 A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-SRGCAGCTGY-
NNVVCAGCTGBN
 A C G T A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--SRGCAGCTGY-
NGNGACAGCTGCN
 A C G T A C G T A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:SRGCAGCTGY-
NNGCAGCTGTC
 A T G C C T A G A T C G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C