Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-330 | -7.615e+02 | 0.0000 | 654.0 | 78.32% | 7365.3 | 16.94% | motif file (matrix) |
svg |
2 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-305 | -7.043e+02 | 0.0000 | 676.0 | 80.96% | 8915.3 | 20.51% | motif file (matrix) |
svg |
3 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-294 | -6.784e+02 | 0.0000 | 620.0 | 74.25% | 7230.3 | 16.63% | motif file (matrix) |
svg |
4 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-271 | -6.246e+02 | 0.0000 | 703.0 | 84.19% | 11317.6 | 26.04% | motif file (matrix) |
svg |
5 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-270 | -6.228e+02 | 0.0000 | 531.0 | 63.59% | 5193.8 | 11.95% | motif file (matrix) |
svg |
6 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-241 | -5.569e+02 | 0.0000 | 504.0 | 60.36% | 5180.8 | 11.92% | motif file (matrix) |
svg |
7 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-215 | -4.967e+02 | 0.0000 | 401.0 | 48.02% | 3271.4 | 7.53% | motif file (matrix) |
svg |
8 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-213 | -4.924e+02 | 0.0000 | 446.0 | 53.41% | 4371.0 | 10.06% | motif file (matrix) |
svg |
9 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-204 | -4.713e+02 | 0.0000 | 431.0 | 51.62% | 4223.7 | 9.72% | motif file (matrix) |
svg |
10 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-201 | -4.645e+02 | 0.0000 | 433.0 | 51.86% | 4348.3 | 10.00% | motif file (matrix) |
svg |
11 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-191 | -4.404e+02 | 0.0000 | 468.0 | 56.05% | 5601.5 | 12.89% | motif file (matrix) |
svg |
12 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-127 | -2.940e+02 | 0.0000 | 374.0 | 44.79% | 5005.9 | 11.52% | motif file (matrix) |
svg |
13 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-116 | -2.681e+02 | 0.0000 | 379.0 | 45.39% | 5594.1 | 12.87% | motif file (matrix) |
svg |
14 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-115 | -2.655e+02 | 0.0000 | 262.0 | 31.38% | 2506.3 | 5.77% | motif file (matrix) |
svg |
15 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-108 | -2.504e+02 | 0.0000 | 375.0 | 44.91% | 5795.0 | 13.33% | motif file (matrix) |
svg |
16 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-87 | -2.006e+02 | 0.0000 | 644.0 | 77.13% | 18856.1 | 43.38% | motif file (matrix) |
svg |
17 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-86 | -1.987e+02 | 0.0000 | 244.0 | 29.22% | 2922.7 | 6.72% | motif file (matrix) |
svg |
18 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-81 | -1.870e+02 | 0.0000 | 353.0 | 42.28% | 6413.0 | 14.75% | motif file (matrix) |
svg |
19 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-37 | -8.536e+01 | 0.0000 | 122.0 | 14.61% | 1599.7 | 3.68% | motif file (matrix) |
svg |
20 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-25 | -5.854e+01 | 0.0000 | 311.0 | 37.25% | 9235.5 | 21.25% | motif file (matrix) |
svg |
21 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-22 | -5.170e+01 | 0.0000 | 88.0 | 10.54% | 1330.0 | 3.06% | motif file (matrix) |
svg |
22 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-21 | -5.027e+01 | 0.0000 | 52.0 | 6.23% | 488.5 | 1.12% | motif file (matrix) |
svg |
23 |
| PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer | 1e-15 | -3.507e+01 | 0.0000 | 81.0 | 9.70% | 1524.2 | 3.51% | motif file (matrix) |
svg |
24 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-14 | -3.351e+01 | 0.0000 | 66.0 | 7.90% | 1116.6 | 2.57% | motif file (matrix) |
svg |
25 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-14 | -3.229e+01 | 0.0000 | 63.0 | 7.54% | 1059.5 | 2.44% | motif file (matrix) |
svg |
26 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-13 | -3.127e+01 | 0.0000 | 59.0 | 7.07% | 969.1 | 2.23% | motif file (matrix) |
svg |
27 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-11 | -2.559e+01 | 0.0000 | 51.0 | 6.11% | 876.7 | 2.02% | motif file (matrix) |
svg |
28 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-9 | -2.110e+01 | 0.0000 | 72.0 | 8.62% | 1697.3 | 3.90% | motif file (matrix) |
svg |
29 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-9 | -2.085e+01 | 0.0000 | 216.0 | 25.87% | 7598.8 | 17.48% | motif file (matrix) |
svg |
30 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-8 | -1.865e+01 | 0.0000 | 94.0 | 11.26% | 2625.6 | 6.04% | motif file (matrix) |
svg |
31 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-6 | -1.430e+01 | 0.0000 | 38.0 | 4.55% | 801.9 | 1.84% | motif file (matrix) |
svg |
32 |
| ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer | 1e-6 | -1.429e+01 | 0.0000 | 18.0 | 2.16% | 224.5 | 0.52% | motif file (matrix) |
svg |
33 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-6 | -1.426e+01 | 0.0000 | 39.0 | 4.67% | 835.4 | 1.92% | motif file (matrix) |
svg |
34 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-5 | -1.354e+01 | 0.0000 | 49.0 | 5.87% | 1206.7 | 2.78% | motif file (matrix) |
svg |
35 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-5 | -1.341e+01 | 0.0000 | 40.0 | 4.79% | 899.3 | 2.07% | motif file (matrix) |
svg |
36 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-5 | -1.319e+01 | 0.0000 | 30.0 | 3.59% | 582.6 | 1.34% | motif file (matrix) |
svg |
37 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.310e+01 | 0.0000 | 35.0 | 4.19% | 744.0 | 1.71% | motif file (matrix) |
svg |
38 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-5 | -1.185e+01 | 0.0001 | 111.0 | 13.29% | 3791.7 | 8.72% | motif file (matrix) |
svg |
39 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.144e+01 | 0.0001 | 169.0 | 20.24% | 6408.9 | 14.74% | motif file (matrix) |
svg |
40 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-4 | -1.103e+01 | 0.0001 | 20.0 | 2.40% | 341.9 | 0.79% | motif file (matrix) |
svg |
41 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.101e+01 | 0.0001 | 46.0 | 5.51% | 1216.9 | 2.80% | motif file (matrix) |
svg |
42 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -1.091e+01 | 0.0002 | 111.0 | 13.29% | 3875.6 | 8.92% | motif file (matrix) |
svg |
43 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-4 | -1.064e+01 | 0.0002 | 116.0 | 13.89% | 4119.8 | 9.48% | motif file (matrix) |
svg |
44 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.040e+01 | 0.0003 | 26.0 | 3.11% | 543.4 | 1.25% | motif file (matrix) |
svg |
45 |
| Sp1(Zf)/Promoter/Homer | 1e-4 | -1.004e+01 | 0.0004 | 27.0 | 3.23% | 588.4 | 1.35% | motif file (matrix) |
svg |
46 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-4 | -9.589e+00 | 0.0005 | 23.0 | 2.75% | 473.4 | 1.09% | motif file (matrix) |
svg |
47 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-4 | -9.528e+00 | 0.0006 | 25.0 | 2.99% | 540.6 | 1.24% | motif file (matrix) |
svg |
48 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -9.318e+00 | 0.0007 | 16.0 | 1.92% | 268.8 | 0.62% | motif file (matrix) |
svg |
49 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -8.943e+00 | 0.0010 | 77.0 | 9.22% | 2593.8 | 5.97% | motif file (matrix) |
svg |
50 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.373e+00 | 0.0017 | 100.0 | 11.98% | 3643.3 | 8.38% | motif file (matrix) |
svg |
51 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-3 | -8.192e+00 | 0.0020 | 31.0 | 3.71% | 804.7 | 1.85% | motif file (matrix) |
svg |
52 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.002e+00 | 0.0023 | 126.0 | 15.09% | 4854.1 | 11.17% | motif file (matrix) |
svg |
53 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.829e+00 | 0.0027 | 21.0 | 2.51% | 468.1 | 1.08% | motif file (matrix) |
svg |
54 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.559e+00 | 0.0035 | 36.0 | 4.31% | 1025.6 | 2.36% | motif file (matrix) |
svg |
55 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.457e+00 | 0.0038 | 97.0 | 11.62% | 3609.6 | 8.30% | motif file (matrix) |
svg |
56 |
| CRE(bZIP)/Promoter/Homer | 1e-3 | -7.134e+00 | 0.0052 | 18.0 | 2.16% | 393.0 | 0.90% | motif file (matrix) |
svg |
57 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -6.994e+00 | 0.0059 | 30.0 | 3.59% | 828.6 | 1.91% | motif file (matrix) |
svg |
58 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -6.966e+00 | 0.0059 | 23.0 | 2.75% | 572.5 | 1.32% | motif file (matrix) |
svg |
59 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-2 | -6.548e+00 | 0.0088 | 8.0 | 0.96% | 109.4 | 0.25% | motif file (matrix) |
svg |
60 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -6.545e+00 | 0.0088 | 30.0 | 3.59% | 854.0 | 1.96% | motif file (matrix) |
svg |
61 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -6.381e+00 | 0.0101 | 51.0 | 6.11% | 1714.4 | 3.94% | motif file (matrix) |
svg |
62 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -6.305e+00 | 0.0107 | 39.0 | 4.67% | 1224.9 | 2.82% | motif file (matrix) |
svg |
63 |
| ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.293e+00 | 0.0107 | 53.0 | 6.35% | 1806.4 | 4.16% | motif file (matrix) |
svg |
64 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -6.017e+00 | 0.0139 | 69.0 | 8.26% | 2525.1 | 5.81% | motif file (matrix) |
svg |
65 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.998e+00 | 0.0139 | 68.0 | 8.14% | 2483.2 | 5.71% | motif file (matrix) |
svg |
66 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.841e+00 | 0.0160 | 23.0 | 2.75% | 626.2 | 1.44% | motif file (matrix) |
svg |
67 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.722e+00 | 0.0178 | 30.0 | 3.59% | 903.2 | 2.08% | motif file (matrix) |
svg |
68 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.589e+00 | 0.0200 | 37.0 | 4.43% | 1195.7 | 2.75% | motif file (matrix) |
svg |
69 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -5.536e+00 | 0.0208 | 36.0 | 4.31% | 1158.3 | 2.66% | motif file (matrix) |
svg |
70 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.496e+00 | 0.0213 | 19.0 | 2.28% | 495.4 | 1.14% | motif file (matrix) |
svg |
71 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-2 | -5.382e+00 | 0.0236 | 15.0 | 1.80% | 357.1 | 0.82% | motif file (matrix) |
svg |
72 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-2 | -5.196e+00 | 0.0280 | 81.0 | 9.70% | 3160.2 | 7.27% | motif file (matrix) |
svg |
73 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -5.194e+00 | 0.0280 | 67.0 | 8.02% | 2528.8 | 5.82% | motif file (matrix) |
svg |
74 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -5.169e+00 | 0.0280 | 23.0 | 2.75% | 663.8 | 1.53% | motif file (matrix) |
svg |
75 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -5.135e+00 | 0.0286 | 33.0 | 3.95% | 1065.1 | 2.45% | motif file (matrix) |
svg |
76 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -5.024e+00 | 0.0315 | 6.0 | 0.72% | 85.4 | 0.20% | motif file (matrix) |
svg |
77 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -5.009e+00 | 0.0316 | 41.0 | 4.91% | 1410.7 | 3.25% | motif file (matrix) |
svg |
78 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -4.953e+00 | 0.0330 | 48.0 | 5.75% | 1716.5 | 3.95% | motif file (matrix) |
svg |
79 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -4.800e+00 | 0.0379 | 58.0 | 6.95% | 2172.5 | 5.00% | motif file (matrix) |
svg |
80 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -4.779e+00 | 0.0382 | 40.0 | 4.79% | 1388.9 | 3.20% | motif file (matrix) |
svg |
81 |
| Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.751e+00 | 0.0388 | 15.0 | 1.80% | 384.1 | 0.88% | motif file (matrix) |
svg |
82 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -4.679e+00 | 0.0412 | 41.0 | 4.91% | 1440.0 | 3.31% | motif file (matrix) |
svg |