Information for 9-GGCTGACGAT (Motif 16)

A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T
Reverse Opposite:
C G T A A C G T A G T C A C T G A C G T A G T C G T C A A C T G G T A C A T G C
p-value:1e-5
log p-value:-1.152e+01
Information Content per bp:1.816
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif52.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets41.5 +/- 24.0bp
Average Position of motif in Background52.3 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mafb/MA0117.2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGCTGACGAT
AAAATGCTGACT--
 A C G T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGCTGACGAT
AATTTGCTGAC---
 A C G T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCTGACGAT
VGCTGWCAVB
 A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGCTGACGAT
TGCTGACTCA
 A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCTGACGAT----
GAATGACGAATAAC
 A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGACGAT-
NCGCGGACGTTG
 A C G T A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGCTGACGAT
--TTGACAG-
 A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGCTGACGAT--
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGACGAT-
TGTCTGDCACCT
 A C G T A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCTGACGAT
-GATGACGT-
 A T C G A C T G A G T C A C G T A C T G G T C A A G T C C T A G G T C A C G A T
A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T