Information for 3-TGTTTGCTCAGCT (Motif 2)

G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T
Reverse Opposite:
C G T A A C T G A T G C C G A T C T A G C T G A C T A G G T A C C G T A G T C A C G T A G A T C C T G A
p-value:1e-47
log p-value:-1.089e+02
Information Content per bp:1.769
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.79%
Number of Background Sequences with motif25.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.6 +/- 16.6bp
Average Position of motif in Background53.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGCTCAGCT--
NSTGTTTRCWCAGBNNN
 A C G T A C G T G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTTTGCTCAGCT
TRTTTACTTW---
 G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTTTGCTCAGCT
TGTTTACTTAGG-
 G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGTTTGCTCAGCT
TCCATGTTTACTTTG--
 A C G T A C G T A C G T A C G T G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTTTGCTCAGCT
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTCAGCT
TGTTTACTTT---
 G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTCAGCT
TGTTTACTTT---
 G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTTTGCTCAGCT
CNTGTTTACATA---
 A C G T A C G T G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:TGTTTGCTCAGCT----
-------HCAGCTGDTN
 G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTCAGCT
TGTTTAC------
 G A C T C T A G C G A T A C G T A C G T C A T G A G T C G A C T A G T C C G T A A T C G G T A C A C G T
G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T