Information for 14-GCRGATGAGA (Motif 16)

C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C G T C A A C G T A G T C A G C T C T A G A G T C
p-value:1e-5
log p-value:-1.329e+01
Information Content per bp:1.783
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif184.5
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets34.0 +/- 25.4bp
Average Position of motif in Background52.7 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCRGATGAGA
CGCAGCTGCG-
 A C G T C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCRGATGAGA
ANCAGCTG---
 A C G T C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCRGATGAGA--
GGTGYTGACAGS
 C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

POL002.1_INR/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCRGATGAGA
NNNANTGA--
 C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCRGATGAGA-
----TTGACAG
 C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCRGATGAGA--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCRGATGAGA-
---RHTGWCAR
 C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCRGATGAGA---
---ACTGAAACCA
 C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCRGATGAGA
--ARNTGACA
 C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCRGATGAGA-
NVCAGCTGBBNN
 A C G T C T A G A G T C T C G A T C A G G T C A A C G T A C T G C G T A C T A G C G T A A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C