Information for 1-RCAGCTGCYB (Motif 1)

T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T
Reverse Opposite:
T C G A C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C
p-value:1e-384
log p-value:-8.844e+02
Information Content per bp:1.723
Number of Target Sequences with motif678.0
Percentage of Target Sequences with motif77.93%
Number of Background Sequences with motif6271.6
Percentage of Background Sequences with motif14.48%
Average Position of motif in Targets50.9 +/- 21.7bp
Average Position of motif in Background49.9 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--RCAGCTGCYB
NNACAGCTGC--
 A C G T A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:RCAGCTGCYB
ACAGCTGTTN
 T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RCAGCTGCYB
NCAGCTGCTG
 T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RCAGCTGCYB--
TGCAGCTGTCCCT
 A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--RCAGCTGCYB
NNGCAGCTGTC-
 A C G T A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-RCAGCTGCYB
AGCAGCTGCT-
 A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-RCAGCTGCYB-
AGCAGCTGCTNN
 A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--RCAGCTGCYB
NNGCAGCTGTT-
 A C G T A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-RCAGCTGCYB-
NVCAGCTGBBNN
 A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:10
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--RCAGCTGCYB
NNVCAGCTGB--
 A C G T A C G T T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A G C T
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T