Information for 5-AAGGGAGCGC (Motif 5)

T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C
Reverse Opposite:
C T A G A T G C A T C G G T A C G A C T A T G C A T G C A T G C A G C T A C G T
p-value:1e-11
log p-value:-2.712e+01
Information Content per bp:1.662
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.71%
Number of Background Sequences with motif747.7
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets53.4 +/- 25.8bp
Average Position of motif in Background47.5 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0009.1_E2F3_1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAGGGAGCGC---
ATAAGGGCGCGCGAT
 A C G T A C G T T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AAGGGAGCGC----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAGGGAGCGC---
ATAAAGGCGCGCGAT
 A C G T A C G T T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AAGGGAGCGC
--CGGAGC--
 T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGGGAGCGC--
--GGGAGGACNG
 T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C A C G T A C G T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAGGGAGCGC
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C G T T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAGGGAGCGC----
AAGGGGGCGTGGCC
 T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C A C G T A C G T A C G T A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

KLF13/MA0657.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAGGGAGCGC-----
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C A C G T A C G T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGGGAGCGC
TGTCAGGGGGCG-
 A C G T A C G T A C G T T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGGAGCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T T G C A T C G A T A C G T A C G T A C G C T G A C A T G T A G C T A C G G A T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G