Information for 20-CAGCWAGCMKGTG (Motif 35)

A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C G T A C A C T G A C T G A G T C A C G T G C A T A C T G A G T C A C G T A C T G
p-value:1e-7
log p-value:-1.691e+01
Information Content per bp:1.895
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif21.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets40.7 +/- 24.3bp
Average Position of motif in Background45.9 +/- 39.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CAGCWAGCMKGTG---
----SDGCAGGTGCNS
 A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAGCWAGCMKGTG-
-----AACAGGTGT
 A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CAGCWAGCMKGTG--
-----NNCAGGTGNN
 A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGCWAGCMKGTG
-AGGAAACAGCTG
 A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CAGCWAGCMKGTG--
-----NNCAGGTGTN
 A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGCWAGCMKGTG
-----ACCACGTG
 A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAGCWAGCMKGTG--
-----NNCAGGTGCG
 A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAGCWAGCMKGTG--
-----GACAGGTGTN
 A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CAGCWAGCMKGTG
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGCWAGCMKGTG
DCTCAGCAGG------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G A T C G T A A C T G A G T C G T A C C A T G A C T G A C G T A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T