Information for 3-CTCTSCCMCCCGCGGT (Motif 3)

A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T
Reverse Opposite:
C T G A A T G C A G T C C T A G A G T C A T C G A C T G A C T G A C G T C T A G C T A G A T G C C G T A A C T G C G T A A C T G
p-value:1e-16
log p-value:-3.796e+01
Information Content per bp:1.776
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.6 +/- 18.0bp
Average Position of motif in Background38.2 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC4/MA0751.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCTSCCMCCCGCGGT--
---GACCCCCCGCTGTGC
 A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCTSCCMCCCGCGGT--
---GACCCCCCGCTGCGC
 A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTCTSCCMCCCGCGGT-
---GACCCCCCGCTGTG
 A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

GLIS2/MA0736.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTCTSCCMCCCGCGGT-
---GACCCCCCGCGAAG
 A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T A C G T
A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTCTSCCMCCCGCGGT-
---CCCCCCCGGGGGNN
 A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTCTSCCMCCCGCGGT--
---ACCCCCCCGGGGGGN
 A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCTSCCMCCCGCGGT
--CCCCCGCCCCCGCC
 A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTCTSCCMCCCGCGGT--
---NCCCCCCCGGGGGGN
 A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTSCCMCCCGCGGT
GCTCCGCCCMCY-----
 A C G T A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTCTSCCMCCCGCGGT
--CCCCCCCC------
 A G T C A C G T A G T C G A C T T A C G A G T C A G T C T G C A A G T C A G T C A T G C A C T G A G T C A C T G A T C G A G C T
A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T