Information for 1-ATTTGCATAWNNA (Motif 1)

C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
Reverse Opposite:
C G A T C G A T C A G T G C T A G A C T C G T A C G A T C A T G A G T C G T C A G C T A C G T A G C A T
p-value:1e-122
log p-value:-2.832e+02
Information Content per bp:1.603
Number of Target Sequences with motif175.0
Percentage of Target Sequences with motif24.86%
Number of Background Sequences with motif1064.9
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets51.1 +/- 24.3bp
Average Position of motif in Background49.4 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:ATTTGCATAWNNA
ATTTGCATAA---
 C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.96
Offset:-3
Orientation:forward strand
Alignment:---ATTTGCATAWNNA
TTCATTTGCATAT---
 A C G T A C G T A C G T C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:ATTTGCATAWNNA
ATTTGCATAT---
 C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:ATTTGCATAWNNA
ATTTGCATA----
 C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGCATAWNNA
AATTTGCATANT--
 A C G T C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.91
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCATAWNNA
TNTAATTTGCATANNN-
 A C G T A C G T A C G T A C G T C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.91
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCATAWNNA
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.91
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCATAWNNA
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:ATTTGCATAWNNA
ATTTGCATA----
 C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCATAWNNA
BTVATTWGCATA----
 A C G T A C G T A C G T C G T A A C G T C A G T A C G T T C A G G T A C G C T A G C A T C T G A C G A T G T C A G C T A G C T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T