Information for 7-CAAAGATTAA (Motif 9)

G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A
Reverse Opposite:
A G C T A C G T T G C A C T G A A C G T A G T C A C G T A C G T A C G T A C T G
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.840
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif142.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets48.2 +/- 30.4bp
Average Position of motif in Background47.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7/MA0769.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAAAGATTAA---
-AAAGATCAAAGG
 G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A A C G T A C G T A C G T
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CAAAGATTAA
ANGNAAAGGTCA-
 A C G T A C G T A C G T G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

LEF1/MA0768.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAAAGATTAA------
-AAAGATCAAAGGGTT
 G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAAAGATTAA
GGTTAAACATTAA
 A C G T A C G T A C G T G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CAAAGATTAA
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CAAAGATTAA
--NGGATTAA
 G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAAAGATTAA-
-VRGGATTARN
 G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CAAAGATTAA-
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAAAGATTAA---
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAAAGATTAA---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T G T A C C G T A G T C A C G T A C T A G T G C A A G C T A C G T C G T A C T G A A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G