Information for 4-CWAAAAGTTGCWA (Motif 8)

A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A
Reverse Opposite:
C G A T C G A T C A T G A G T C C G T A C G T A T G A C C G A T A C G T A C G T A C G T C G T A A C T G
p-value:1e-11
log p-value:-2.670e+01
Information Content per bp:1.789
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.5 +/- 16.6bp
Average Position of motif in Background53.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CWAAAAGTTGCWA--
GAAAAAATTGCAAGG
 A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CWAAAAGTTGCWA
GCTATAAATAGC--
 A C G T A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CWAAAAGTTGCWA
ACTATAAATAGA--
 A C G T A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CWAAAAGTTGCWA
TCTAAAAATAGA--
 A C G T A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CWAAAAGTTGCWA
ATGCTAAAAATAGAA-
 A C G T A C G T A C G T A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CWAAAAGTTGCWA
GCTAAAAATAGC--
 A C G T A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CWAAAAGTTGCWA----
GGAAAAATTGTTAGGAA
 A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CWAAAAGTTGCWA
DCYAAAAATAGM--
 A C G T A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CWAAAAGTTGCWA-
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CWAAAAGTTGCWA
---NATGTTGCAA
 A G T C C G A T G T C A T G C A C G T A C G T A A C T G A C G T A C G T A C T G G A T C C G T A C G T A
A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A