Information for 3-TTGTGAAATTACA (Motif 7)

G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A
Reverse Opposite:
C G A T A C T G A C G T G T C A C G T A C G A T C G A T C G A T G A T C C G T A T G A C G T C A C G T A
p-value:1e-11
log p-value:-2.670e+01
Information Content per bp:1.704
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif235.5
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets58.5 +/- 26.0bp
Average Position of motif in Background50.2 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTGTGAAATTACA--
TATTGGTAATTACCTT
 A C G T G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTGTGAAATTACA-----
---TNGAATTTCATTNAN
 G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGAAATTACA
NATTGTGCAAT----
 A C G T A C G T G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGAAATTACA--
CTGANNTAATTATNNN
 A C G T G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A A C G T A C G T
T A G C G A C T C A T G C T G A C T A G T A C G G A C T C G T A C G T A C G A T A C G T C T G A G A C T G A C T A G T C A G T C

PH0022.1_Dlx3/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGTGAAATTACA----
NNNGGTAATTATNGNGN
 G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

ALX3/MA0634.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTGTGAAATTACA
---TCTAATTAAA
 G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A
A C G T A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

PH0072.1_Hoxc8/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTGTGAAATTACA--
TTGGGGTAATTAACGT
 A C G T G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A A C G T A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTGTGAAATTACA
----GCAATTAA-
 G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A
A C G T A C G T A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T

PH0103.1_Meox1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGAAATTACA--
CTGAGGTAATTACCNC
 A C G T G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A A C G T A C G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

Dlx4/MA0881.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTGTGAAATTACA
----CCAATTAC-
 G C A T A C G T A C T G C G A T C T A G G C T A C G T A C G T A G C A T C A G T G T C A G T A C C G T A
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T