Information for 1-SCTATACTCC (Motif 8)

A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C
Reverse Opposite:
A C T G C T A G C G T A A C T G A C G T C G T A A C G T C G T A A C T G A T G C
p-value:1e-10
log p-value:-2.389e+01
Information Content per bp:1.800
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif30.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets59.9 +/- 21.4bp
Average Position of motif in Background42.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SCTATACTCC--
-CTAATCCTCTT
 A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C A C G T A C G T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--SCTATACTCC
AAGATATCCTT-
 A C G T A C G T A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-SCTATACTCC------
TACGAGACTCCTCTAAC
 A C G T A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:SCTATACTCC-
-----GCTCCG
 A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:SCTATACTCC-
-CNGTCCTCCC
 A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----SCTATACTCC--
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:SCTATACTCC
GCTAATCC--
 A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:SCTATACTCC-
-----GCTTCC
 A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------SCTATACTCC
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--SCTATACTCC----
AGGCTAATCCCCAANG
 A C G T A C G T A T C G A G T C A C G T C G T A G C A T T G C A A G T C A C G T A G T C G T A C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G