Information for 4-TGGATGGGGTCCBGGA (Motif 7)

C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C T A C G C T A G A C T G G T C A A T G C G T A C A G T C A G T C C G T A A C G T A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.753
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.6 +/- 29.3bp
Average Position of motif in Background48.7 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------TGGATGGGGTCCBGGA
NTTNTATGAATGTGNNC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGGATGGGGTCCBGGA
TTGGCANNNTGCCAAG-
 A C G T C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:TGGATGGGGTCCBGGA--
--------TTCCNGGAAG
 C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TGGATGGGGTCCBGGA
---NRRGGGTCTT---
 C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A
A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:TGGATGGGGTCCBGGA------
-------TTTCCTGGAAAGNNN
 C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TGGATGGGGTCCBGGA
TGTCAGGGGGCG----
 C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:TGGATGGGGTCCBGGA--
-------TTTCCTGGAAA
 C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.48
Offset:6
Orientation:forward strand
Alignment:TGGATGGGGTCCBGGA--
------NTTTCCNGGAAA
 C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.47
Offset:6
Orientation:forward strand
Alignment:TGGATGGGGTCCBGGA-
------ATTTCCAAGAA
 C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:TGGATGGGGTCCBGGA
-NGATGACGTCAT---
 C G A T C T A G C T A G G T C A A C G T C T A G C T A G A C T G A T C G A C G T A G T C A G T C A T G C C T A G A C T G C G T A
A C G T C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T