Information for 3-AGCTACACTGGGC (Motif 4)

C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C
Reverse Opposite:
A C T G A T G C A G T C A T G C C G T A C T A G A G C T A C T G A C G T C T G A A T C G A G T C A G C T
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.813
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.2 +/- 16.3bp
Average Position of motif in Background50.8 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGCTACACTGGGC-
----WDNCTGGGCA
 C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGCTACACTGGGC
----ACAAAG---
 C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGCTACACTGGGC---
----ACAAAGGNBCCT
 C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGCTACACTGGGC---
NNTNNACAATGGGANNN
 A C G T C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCTACACTGGGC
NTTGATACATT----
 A C G T A C G T C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCTACACTGGGC
--GAACAATGGN-
 C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGCTACACTGGGC
---AACAAAGG--
 C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCTACACTGGGC
CCAGGAACAG-----
 A C G T A C G T C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGCTACACTGGGC
-VRRACAAWGG--
 C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGCTACACTGGGC
-VRAACAATGG--
 C T G A C T A G A T G C A G C T C G T A A G T C C T G A A G T C C G A T A T C G C T A G A T C G A G T C
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T