Information for 9-TCCATCTTGC (Motif 21)

A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C T G C G T A A G C T A C T G A C T G C G T A
p-value:1e-7
log p-value:-1.647e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 23.0bp
Average Position of motif in Background25.5 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TCCATCTTGC
GCNGCCATCTTG-
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCCATCTTGC
GCCGCCATCTTG-
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCCATCTTGC
GYCATCMATCAT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCCATCTTGC---
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCATCTTGC
GCCATCTGTT
 A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCCATCTTGC
ACCATCTGTT
 A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCATCTTGC--
--GGTCTGGCAT
 A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCATCTTGC-------
-CCGTCTTCCCCCTCAC
 A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCCATCTTGC
ATTTTCCATT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCCATCTTGC
RCCATMTGTT
 A C G T A G T C A G T C C T G A A C G T A G T C A C G T C G A T A C T G A G T C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T