Information for 2-CGGAAGCCAC (Motif 3)

T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C
Reverse Opposite:
T C A G A G C T C A T G T A C G A G T C A G C T G C A T G T A C A G T C A C T G
p-value:1e-14
log p-value:-3.381e+01
Information Content per bp:1.646
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif23.04%
Number of Background Sequences with motif4464.8
Percentage of Background Sequences with motif9.18%
Average Position of motif in Targets52.1 +/- 27.0bp
Average Position of motif in Background49.5 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CGGAAGCCAC---
---AAACCACANN
 T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CGGAAGCCAC----
---AAACCACAGAN
 T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGGAAGCCAC
-NGAAGC---
 T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGAAGCCAC--
--NAAACCACAG
 T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C A C G T A C G T
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CGGAAGCCAC
----ATCCAC
 T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGGAAGCCAC
ACCGGAAG----
 A C G T A C G T T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGGAAGCCAC---
-SSAATCCACANN
 T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAGCCAC
DCCGGAARYN--
 A C G T A C G T T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGAAGCCAC-
TCCAATCCACA
 T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGGAAGCCAC
ANCCGGAAGT---
 A C G T A C G T A C G T T G A C T C A G C A T G C G T A C T G A T C A G A T G C G T A C T C G A A G T C
C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T A C G T A C G T