Information for 7-CGCAAGGGCAAAT (Motif 15)

A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T C T A G A G T C A G T C A G T C A C G T A C G T A T C G G T A C A C T G
p-value:1e-7
log p-value:-1.645e+01
Information Content per bp:1.943
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 29.0bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGCAAGGGCAAAT
--CAAGGHCANV-
 A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCAAGGGCAAAT
BTCAAGGTCA---
 A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCAAGGGCAAAT
NTCAAGGTCA---
 A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCAAGGGCAAAT
ACGAAAGCGAAAGT
 A C G T A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCAAGGGCAAAT
-TCAAGGTCATA-
 A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCAAGGGCAAAT
-TCAAGGTCAT--
 A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGCAAGGGCAAAT
-TCAAGGTCAN--
 A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCAAGGGCAAAT--
TATTCAAGGTCATGCGA
 A C G T A C G T A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGCAAGGGCAAAT
---AAGGTCAC--
 A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGCAAGGGCAAAT
AAGTTCAAGGTCAGC-
 A C G T A C G T A C G T A G T C A C T G A T G C C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T