Information for 11-TTACACTCAWAGG (Motif 9)

A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C G T A C T G C G T A C T A G A C G T A C T G A G C T G T C A G T C A
p-value:1e-94
log p-value:-2.184e+02
Information Content per bp:1.759
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif12.72%
Number of Background Sequences with motif33.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.2 +/- 20.5bp
Average Position of motif in Background71.5 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTACACTCAWAGG
ATTTGCATACAATGG
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTACACTCAWAGG--
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTACACTCAWAGG
SCTGTCAVTCAV---
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTACACTCAWAGG
NCTGTCAATCAN---
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTACACTCAWAGG
TBGCACGCAA---
 A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTACACTCAWAGG---
--ACATTCATGACACG
 A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G A C G T A C G T A C G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTACACTCAWAGG
--CCAATCAA---
 A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTACACTCAWAGG
AGCCACTCAAG--
 A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTACACTCAWAGG
GSCTGTCACTCA----
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTACACTCAWAGG
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A A G T C G C A T A G T C C G T A G C A T C G T A C T A G C T A G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T