Information for 19-TTAGAAAAGAATG (Motif 16)

A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G
Reverse Opposite:
A T G C G T C A A C G T G C A T A T G C G A C T A C G T A C G T A C G T A G T C A C G T G T C A C G T A
p-value:1e-12
log p-value:-2.842e+01
Information Content per bp:1.795
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 28.7bp
Average Position of motif in Background42.0 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTAGAAAAGAATG-
--AGAAACGAAAGT
 A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTAGAAAAGAATG-
ATTTGCATACAATGG
 A C G T A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTAGAAAAGAATG
AAATAAGAAAAAAC--
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TTAGAAAAGAATG
TATCATTAGAACGCT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTAGAAAAGAATG
--AGATAAGA---
 A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTAGAAAAGAATG-
GGAGAAAGGTGCGA
 A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTAGAAAAGAATG
WAAGTAAAYA---
 A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTAGAAAAGAATG
CSTGGGAAAD-----
 A C G T A C G T A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TTAGAAAAGAATG
CCGTATTATAAACAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTAGAAAAGAATG
AAAGTAAACA---
 A C G T A C G T C G T A A C T G T G C A C G T A C G T A C T G A A T C G C G T A T G C A A C G T A T C G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T