Information for 15-GTCATAGTTCATMTCT (Motif 13)

T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
Reverse Opposite:
C G T A A C T G C T G A A C T G C G T A C G A T A C T G C G T A C T G A A T G C G A C T C G T A G A C T A C T G C T G A A G T C
p-value:1e-17
log p-value:-3.930e+01
Information Content per bp:1.709
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.9 +/- 17.0bp
Average Position of motif in Background45.2 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRG/MA0856.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCATAGTTCATMTCT
GGGGTCAAAGGTCA-----
 A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCATAGTTCATMTCT
GAGGTCAAAGGTCA-----
 A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCATAGTTCATMTCT
GGGGTCAAAGGTCA-----
 A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCATAGTTCATMTCT
GAGGTCAAAGGTCA-----
 A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCATAGTTCATMTCT
GGGGTCAAAGGTCA-----
 A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTCATAGTTCATMTCT
CANAGNNCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCATAGTTCATMTCT
GGGGTCAAAGTCCAAT---
 A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCATAGTTCATMTCT
AAAGGTCAAAGGTCAAC---
 A C G T A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCATAGTTCATMTCT
AGGGGTCAGAGGTCA-----
 A C G T A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCATAGTTCATMTCT
AGAGTCCAAAGTCCA-----
 A C G T A C G T A C G T A C G T T A C G A G C T A G T C C G T A C G A T C G T A T A C G A G C T A C G T G T A C G C T A G A C T T G A C A G C T G T A C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T