Information for 12-CCGACTAAAG (Motif 10)

G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G
Reverse Opposite:
A G T C A G C T A C G T A G C T C G T A C A T G G A C T T G A C T C A G C T A G
p-value:1e-37
log p-value:-8.605e+01
Information Content per bp:1.706
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif14.96%
Number of Background Sequences with motif735.8
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets52.0 +/- 21.6bp
Average Position of motif in Background49.9 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0184.1_Tbp_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGACTAAAG-----
CCGATTTAAGCGACC
 G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G A C G T A C G T A C G T A C G T A C G T
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCGACTAAAG---
----NTCAAGTGG
 G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCGACTAAAG---
---GCTAAACGGT
 G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCGACTAAAG----
----CTYRAGTGSY
 G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCGACTAAAG
CCYMATAAAA
 G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCGACTAAAG----
CCGCCCAAGGGCAG
 G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G A C G T A C G T A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCGACTAAAG---
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

E2F7/MA0758.1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CCGACTAAAG
TTTTCCCGCCAAAA-
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCGACTAAAG
-TGACTCA--
 G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G
A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCGACTAAAG---
---GCTAATTGCT
 G A T C A G T C A C T G C T G A G T A C G C A T T C G A C G T A C T G A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T