Information for 9-CRAATGTAADRAA (Motif 5)

A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C G A C T A C G T A G C T C T G A A G T C C G T A A C G T A C G T A G T C C T A G
p-value:1e-129
log p-value:-2.988e+02
Information Content per bp:1.774
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif16.60%
Number of Background Sequences with motif69.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets53.4 +/- 30.0bp
Average Position of motif in Background42.1 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxk1/MA0852.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CRAATGTAADRAA----
AAAATGTAAACAAACAG
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CRAATGTAADRAA----
AAAATGTAAACAAACAG
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0019.1_Foxl1_1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CRAATGTAADRAA----
TAAATGTAAACAAAGGT
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CRAATGTAADRAA----
AAAAAGTAAACAAAGAC
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxj3/MA0851.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CRAATGTAADRAA----
AAAAAGTAAACAAACAC
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CRAATGTAADRAA----
AAAAAGTAAACAAACAC
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CRAATGTAADRAA-
--TAAGTAAACAAA
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A A C G T
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CRAATGTAADRAA
--TATGTAAATAT
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CRAATGTAADRAA-
--TATGTAAACANG
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CRAATGTAADRAA---
-CAAAGTAAACANNNN
 A G T C C T A G C G T A G T C A A C G T A C T G A G C T T C G A C G T A C T G A T C A G C G T A C G T A A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A