Information for 2-ATTCATACTG (Motif 3)

C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G
Reverse Opposite:
A T G C G C T A C A T G A G C T T C G A C A G T A C T G T C G A T C G A G A C T
p-value:1e-252
log p-value:-5.809e+02
Information Content per bp:1.682
Number of Target Sequences with motif187.0
Percentage of Target Sequences with motif39.79%
Number of Background Sequences with motif389.0
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets48.2 +/- 30.0bp
Average Position of motif in Background48.3 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ATTCATACTG-
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATTCATACTG----
BAGTCATANTGAAAG
 A C G T C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G A C G T A C G T A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTCATACTG-----
NNTCCTGCTGTGNNN
 C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTCATACTG------
WNAGTCADAVTGAAACTN
 A C G T A C G T C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATTCATACTG-----
TCNCCTGCTGNGNNN
 C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATTCATACTG--
ACATTCATGACACG
 A C G T A C G T C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATTCATACTG-----
TNTCCTGCTGTGNNG
 C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATTCATACTG---
---CCTGCTGAGH
 C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTCATACTG
TGAGTCATTTC-
 A C G T A C G T C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATTCATACTG
GAATATTCAT----
 A C G T A C G T A C G T A C G T C T G A A G C T A G C T T G A C G T C A A G C T T C G A G T A C C G A T T A C G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T