Information for 21-CTTCACACGT (Motif 20)

A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C G T C T A G A C G T A C T G C G T A C G T A A C T G
p-value:1e-7
log p-value:-1.735e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.2 +/- 7.6bp
Average Position of motif in Background62.1 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX20/MA0689.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CTTCACACGT-
CTTCACACCTA
 A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CTTCACACGT-
-TTCACACCTT
 A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CTTCACACGT
TTTCACACCT
 A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTTCACACGT-
TTTCACACCTN
 A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CTTCACACGT-
NTTTTCACACCTT
 A C G T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTTCACACGT
KTTCACACCT
 A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CTTCACACGT
--TCACACCT
 A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CTTCACACGT
--TCACACCT
 A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTTCACACGT-
-TTMACACCTT
 A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTTCACACGT
--TCACACCT
 A G T C A C G T A C G T G T A C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T