Information for 6-CAGACTCCTC (Motif 17)

A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C
Reverse Opposite:
A T C G C T G A C A T G C T A G G T C A A C T G C A G T T G A C A C G T C T A G
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.827
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif380.2
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets43.6 +/- 22.2bp
Average Position of motif in Background49.8 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CAGACTCCTC----
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTCCTC
CCAGACRSVB-
 A C G T A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTCCTC
BCAGACWA---
 A C G T A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGACTCCTC--
--CNGTCCTCCC
 A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C A C G T A C G T
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTCCTC
CCAGACAG---
 A C G T A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGACTCCTC---
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAGACTCCTC-
-----TCCCCA
 A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGACTCCTC
AGCAACAGCCGCACC
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CAGACTCCTC-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

POL002.1_INR/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGACTCCTC
TCAGTCTT---
 A C G T A G T C G T C A A C T G G T C A T G A C A C G T A G T C G T A C G A C T A T G C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T