Information for 5-CCTGACCTCG (Motif 14)

T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G
Reverse Opposite:
A T G C T A C G C T G A A C T G A C T G C G A T G A T C C G T A A T C G A T C G
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.847
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif46.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets41.1 +/- 22.6bp
Average Position of motif in Background51.8 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTCG
--TGACCTYA
 T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTCG
--TGACCYCT
 T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTCG--
--TGACCTTGAT
 T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTCG
--TGACCT--
 T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCTGACCTCG-
-NTGACCTTGA
 T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTCG-
-CTGACCTTTG
 T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCTGACCTCG----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTCG--
--TGACCTTGAV
 T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTCG
-GTGACCTT-
 T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCTGACCTCG
BNTGDCCTTG
 T A G C A T G C A C G T C T A G C G T A G T A C A G T C A G C T A T G C A T C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G