Information for 13-ARGCAGCBRC (Motif 22)

C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C
Reverse Opposite:
A T C G A G T C T G A C C A T G A T G C A G C T A T C G A T G C A G T C G A C T
p-value:1e-5
log p-value:-1.373e+01
Information Content per bp:1.691
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif9.28%
Number of Background Sequences with motif1735.3
Percentage of Background Sequences with motif3.80%
Average Position of motif in Targets44.8 +/- 28.7bp
Average Position of motif in Background50.7 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:ARGCAGCBRC
---CAGCC--
 C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ARGCAGCBRC---
-AGCAGCTGCTNN
 C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C A C G T A C G T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ARGCAGCBRC-
-AGCAGCTGCT
 C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ARGCAGCBRC--
--NCAGCTGCTG
 C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ARGCAGCBRC
NNACAGCTGC
 C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ARGCAGCBRC-
-CGCAGCTGCG
 C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ARGCAGCBRC--
-GACAGCTGCAG
 C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ARGCAGCBRC--
-AACAGCTGCAG
 C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ARGCAGCBRC-
NGNGACAGCTGCN
 A C G T A C G T C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ARGCAGCBRC
-ANCAGCTG-
 C T G A T C A G T A C G A T G C T C G A A T C G G T A C A C T G T C A G T A G C
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T