Information for 9-GGTBCAATVTAAA (Motif 15)

C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A
Reverse Opposite:
A C G T A C G T A C G T T C G A A G T C C G T A A C G T A C G T A C T G T A G C C G T A A T G C A G T C
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.808
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.8 +/- 20.2bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGTBCAATVTAAA--
---NCTAAGTAAACA
 C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A A C G T A C G T
A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGTBCAATVTAAA------
----CAAAGTAAACANNNN
 C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGTBCAATVTAAA----
-TGCCAAAATAAACANN
 C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A A C G T A C G T A C G T A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGTBCAATVTAAA--
-----AAAGTAAACA
 C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGTBCAATVTAAA----
GTTCAAAAAAAAAATTC
 C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTBCAATVTAAA
AGATGCAATCCC--
 A C G T C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGTBCAATVTAAA--
-----AAAGTAAACA
 C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTBCAATVTAAA-----
---NCWRWGTAAACANSV
 C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GGTBCAATVTAAA
GGCAAAAGTCCAATAA---
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTBCAATVTAAA--
AGCCGAAAAAAAAAT
 C T A G A T C G A C G T A C T G A G T C C G T A G T C A C G A T T A C G A G C T C G T A G T C A G T C A A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T