Information for 8-CCGAAAGCCASCT (Motif 13)

A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T
Reverse Opposite:
C T G A A C T G T A G C A C G T A C T G A T C G A G T C A G C T A C G T A G C T A G T C T C A G C T A G
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.704
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif156.3
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets36.1 +/- 24.8bp
Average Position of motif in Background50.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CCGAAAGCCASCT---
------GCCATCTGTT
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCGAAAGCCASCT-----
------GCCAGCTGBTNB
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCGAAAGCCASCT--
-----NNACAGCTGC
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CCGAAAGCCASCT----
-------CCAGCTGTTN
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CCGAAAGCCASCT-----
------NVCAGCTGBBNN
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCGAAAGCCASCT--
-----NAHCAGCTGD
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCGAAAGCCASCT------
------TGCAGCTGTCCCT
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CCGAAAGCCASCT-
-------CAAGCTT
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CCGAAAGCCASCT----
-------NCAGCTGCTG
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CCGAAAGCCASCT--
-----NAACAGCTGT
 A G T C A G T C T C A G C T G A T C G A C T G A C T A G A T G C G T A C C G T A A T C G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T