p-value: | 1e-8 |
log p-value: | -2.003e+01 |
Information Content per bp: | 1.818 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.70% |
Number of Background Sequences with motif | 3.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 73.8 +/- 8.9bp |
Average Position of motif in Background | 64.6 +/- 12.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0013.1_Cdx2/Jaspar
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA-- --NAATTTTATTACCNNN |
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HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA ---TGATTTATGGCC- |
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PH0056.1_Hoxa9/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA- ANTAATTTTATGGCCGN |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA ----NTTTTATGAC-- |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA ---TGATTTATGGCC- |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA ---DGWTTTATGRCN- |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA --NTGATTTATGGCC- |
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PH0075.1_Hoxd10/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA- NTNAATTTTATTGNATT |
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PH0012.1_Cdx1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA-- --NAATTTTATTACCTNN |
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CDX2/MA0465.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TTRWGTKTTMTRRMCA -----TTTTATGGCTN |
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