Information for 11-CAGACAGATAGCAAAT (Motif 21)

A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T
Reverse Opposite:
C T G A A C G T A C G T A C G T A T C G A G T C A G C T T C G A A C G T A G T C A C G T C T A G A C G T G T A C A C G T A C T G
p-value:1e-9
log p-value:-2.205e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 29.2bp
Average Position of motif in Background44.2 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGATAGCAAAT
CCAGACAG---------
 A C G T A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGACAGATAGCAAAT--
---AAAAATAACAAACGG
 A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGATAGCAAAT
CCAGACRSVB-------
 A C G T A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CAGACAGATAGCAAAT
------NACAGGAAAT
 A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGACAGATAGCAAAT
--AACAGATGGC----
 A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAGACAGATAGCAAAT---
-----AAATAAGAAAAAAC
 A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

GATA2/MA0036.2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGACAGATAGCAAAT-
---NCAGATAAGAANNN
 A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T A C G T
A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGATAGCAAAT
BCAGACWA---------
 A C G T A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGACAGATAGCAAAT----
----AAGATCGGAANTNNNA
 A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGACAGATAGCAAAT----
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A G T C C G T A A C T G C G T A G A T C C G T A C T A G C G T A A C G T C T G A A C T G A T G C C G T A C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G