Information for 3-ATGMGSASYRCYCCGG (Motif 5)

C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G
Reverse Opposite:
A G T C A G T C A C T G A C T G T C G A A C T G A G T C C T G A A T G C A C G T A T C G A G T C A C T G A G T C G T C A A C G T
p-value:1e-15
log p-value:-3.627e+01
Information Content per bp:1.840
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 17.8bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.53
Offset:9
Orientation:forward strand
Alignment:ATGMGSASYRCYCCGG
---------GCTCCG-
 C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ATGMGSASYRCYCCGG
NNNNTGAGCACTGTNNG--
 A C G T A C G T A C G T C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----ATGMGSASYRCYCCGG
GCGCATGCGCAC--------
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ATGMGSASYRCYCCGG
--GGGGATTCCCCC--
 C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----ATGMGSASYRCYCCGG
GCGCATGCGCAG--------
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:ATGMGSASYRCYCCGG-----
------NCCCCCCCGGGGGGN
 C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:ATGMGSASYRCYCCGG-----
------ACCCCCCCGGGGGGN
 C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.47
Offset:5
Orientation:forward strand
Alignment:ATGMGSASYRCYCCGG
-----CNGTCCTCCC-
 C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:ATGMGSASYRCYCCGG
----GGACCACCCACG
 C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-ATGMGSASYRCYCCGG
GCCGCGCAGTGCGT---
 A C G T C G T A A C G T A C T G G T A C A C T G A T G C C G T A A T C G A G C T C T A G A G T C A G C T A G T C T G A C A C T G C T A G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T