Information for 9-CCCAGCTACA (Motif 20)

A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A
Reverse Opposite:
A G C T A C T G G A C T T C G A T A C G T G A C A G C T A C T G C T A G T A C G
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.573
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif223.9
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets45.1 +/- 22.5bp
Average Position of motif in Background53.6 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCCAGCTACA
--CAGCC---
 A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCAGCTACA
CACAGN----
 A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCAGCTACA
NAHCAGCTGD-
 A C G T A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGCTACA
TGCCCAGNHW--
 A C G T A C G T A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCAGCTACA-
SCCTAGCAACAG
 A C G T A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCCAGCTACA---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCCAGCTACA-
GACAGCTGCAG
 A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCTACA----
DCHCAGCAGGRGGCC
 A C G T A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCCAGCTACA-
AACAGCTGCAG
 A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCAGCTACA
CGCAGCTGCG
 A T G C G A T C T G A C T C G A A C T G A T G C A G C T C T G A T G A C T C G A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G